Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922316.1_cds_XP_016471125.1_63502
CDS Infomation

[gene=LOC107793305] [db_xref=GeneID:107793305] [protein=ankyrin repeat-containing protein At5g02620-like] [protein_id=XP_016471125.1] [location=complement(join(122307..123167,123638..124049,124811..125199))] [gbkey=CDS]
Sequence

ATGGAAAAACAACAGAGTTTTCGAAATGGGGTGATGGAAAATCAGAAAAGTATTAGGATA
GTAATGGAGAGGCAAGTTAGTTTTGATGTTGAGAAGAAAAGGGATAAAGAATCACCGGGA
AAACGAGGGGATTCACCTCTTCATCTTGCAGCTAGAATAGGGAATTTAGGAAAAGTGAAA
CAACTTATTGAGAAATTTGATGGAAAAGGCATCAAAAGTTTGCTATCTTTGCAAAACCAA
CAGGGTGAGACTGCATTATATGTTGCTGCTGAAAATGGCCACACTTTAGTTGTTGCTGAG
ATGTTGAAATATTTGGACCTTCAAATTGCTTCTTTTGTTGCAAATAATGGCTATGATGCA
TTCCAAGTTGCAGCAAAGCAAGGTCATCTAGAGATACTGAAGGAACTATTGCATTCATTT
CCAAACCTGATTATGGCGACAGATTCATCCAATTCTACAGCCCTACATACAGCAGCTGCT
CAGGGACACACTGATGTGGTAAATCTGCTTCTGGAGATTGATTTGAACCTTGCTAAGATA
GCTCGGAACAATGGGAAGACTGTGCTGCATACAGCAGCAAGAATGGGCCGCTTGGAAATA
GTTAAATCTCTTCTGAGCAGAGATCCTGAGATTGGCCTTAGAACAGATAGTAAAGGCCAA
AGTGCCCTGCACATGGCTGTAAAGGGACAAAATGTTGACATTGTGCGCGAATTAATCAAA
CCGAATCCTGCTGTATTGGCTTTGGAAGATAACAAAGGAAACAGAGCTCTTCACATTGCA
ACAAAAAAGGGACGGGCACAGATGGTACAGTGTCTGATATCAGGTGAATGCATCGATCTG
AATGCCACTAATAAAGCTGGAGAAACGGCTCTTGATATTGCTGAAAAGTTTGGAATGCCA
GAGCTTGTTTCCATTTTGAAGGTGGTGGGAGCTACCCATTCCAAAGATCACGGAAAGGCC
CCAAGCAATGCTAAGCAACTCAAGCAGACTGTCAGTGATATAAGACATGATGTGCAGTCC
CAACTCCAACAGAGTCGACAGACAGGCTTCAAAGTACGGAAAATTGCAAAGAAGGTGAAG
AAGCTGCACATTAGTGGCCTCAACAATGCCATCAACAATGCTACAGTGGTTGCTGTCCTT
ATTGCTACTGTCGCTTTTGCTGCCATCTTCACTGTGCCTGGTCAGTATGTTGAACAGAAA
ACAGATGGCTTTTCGCTTGGTGAAGCGCATGTAGCTGAAAAAGCAGCTTTCATAATCTTC
TTCTTGTTTGACAGTATGGCCTTGTTTATTTCCATTGCTGTTGTTGTTGTTCAGACCTCT
CTTGTTGTGATTGAACCGAGAGCAAAGAAGCTACTCGTGTTTTGGATAAACAGGCTCATG
TGGGCAGCTTGTCTCTTCATCTCAGTTTCCTTTATTTCGCTTTCTTATGTGGTGGTTGGA
TCCAAGGAAAGATGGCTTGCTATATATGCAACTGCGATTGGTAGCATCATAATGCTCACT
ACTATTGGCTCTATGTGCTACTGTGTGGTTCGACATAGGCTAGAAGAGTCAAAGATGAGA
AGCATAAGAAGTACTGGGACTCATTCACATTCGTACGCAATGTCTGTGGTATCAGATACA
GAGATTTACGCTGAAAACTACAAGAGGATGTATGCAGTATAG

Peptide Sequence

PEP ID

XP_016471125.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana tabacum]
Sequence

MEKQQSFRNGVMENQKSIRIVMERQVSFDVEKKRDKESPGKRGDSPLHLAARIGNLGKVK
QLIEKFDGKGIKSLLSLQNQQGETALYVAAENGHTLVVAEMLKYLDLQIASFVANNGYDA
FQVAAKQGHLEILKELLHSFPNLIMATDSSNSTALHTAAAQGHTDVVNLLLEIDLNLAKI
ARNNGKTVLHTAARMGRLEIVKSLLSRDPEIGLRTDSKGQSALHMAVKGQNVDIVRELIK
PNPAVLALEDNKGNRALHIATKKGRAQMVQCLISGECIDLNATNKAGETALDIAEKFGMP
ELVSILKVVGATHSKDHGKAPSNAKQLKQTVSDIRHDVQSQLQQSRQTGFKVRKIAKKVK
KLHISGLNNAINNATVVAVLIATVAFAAIFTVPGQYVEQKTDGFSLGEAHVAEKAAFIIF
FLFDSMALFISIAVVVVQTSLVVIEPRAKKLLVFWINRLMWAACLFISVSFISLSYVVVG
SKERWLAIYATAIGSIIMLTTIGSMCYCVVRHRLEESKMRSIRSTGTHSHSYAMSVVSDT
EIYAENYKRMYAV

Transcript Sequence

Gene sequence data has not been registered.